Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938751.1_cds_XP_016483528.1_74629
CDS Infomation

[gene=LOC107804199] [db_xref=GeneID:107804199] [protein=patatin-like protein 6 isoform X3] [protein_id=XP_016483528.1] [location=complement(join(18919..18936,21463..22563))] [gbkey=CDS]
Sequence

ATGGCGTGTAATGCTATATCAAATACGCAACAAGAACCGAGCATCGATACAGATAAGCTA
AGTTATGAAATTTTTTCTATTTTAGAAAGCAAATTCTTATTCGGTTACAATGATCAAAAG
CTTTGGGTACCTAAAGAATTAACTTCTCCGATTGAAGAGCACAAAAACGATGACGTTTCA
ACGATCAAAAATCAACGAGGAAAAATATGCATCCTCAGTATTGATGGTGGTGGAATGCGA
AACATATTATCGGGAAAAGCTTTAGCGTATTTGGAACAAGCGTTGAAGGTTAAATCGGGA
AATTCACACGCTAGAATCGCTGATTATTTCGACGTCGCTATCGGTTCCGGTGTTGGAGGA
ATTTTCACGGCGATGCTTTTTTCTACAGAAGATAAAAAACGTCCGGTTTTTCAAGCTGAG
GATACGTGGAAGCTTCTGGTTGAACAAGGTAAAAAAATTTACCCTTTGAAAGGGTCAAAT
AATGCCGGAAAGGATTTTCTACGGCGAGTTTTCCGCCGCGGCAACACCGTTTCATCTACT
TCCGGGTTAGAGAAGGCGATGAAAGAAGCGTTTGTGGATAAAAAAACAGGTCGAAGCCTT
ACGTTAAAGGATACGCTTAAACCGGTTTTAATCCCGGTTTATGACCTGTCAAGTACGGCG
CCGTTTTTGTTCTCTCGAGCCGACGCTTTTGAGTCGGAGAGCTTTGATTTCAGATTATGG
GAAGTTTGTAAGGCTACAGCGGCTGAACCAGGAGTTTTCGACCCGGTTTGTATGAAATCT
GTCGATGGAAAAACCGGGTGTGTGGCGGTTGACGGCGGTTTAGCTATGAGTAACCCGACG
GCAGCGGCGATTACTCACGTGCTTCATAACAAACAGGAGTTTCCTTTTGTTAGAGGGGTT
GAGGACATTTTGGTACTTTCGCTTGGAACAGGGCAGCTTTTAGAAGGAAGCTTTGAATAT
GAACATGTTAAAAAATGGAAAGCTAAGGACTGGGCTAAACCTATGGCTCGCATCTCCGGC
GATGGCACCGCCGATATGGTGGATCACTCCGTTGCTATGGCTTTCGGCCAATGTCGTAGC
AATAACTACGTCCGCATTCAGTTAAACTCTTCTTCTTGA

Peptide Sequence

PEP ID

XP_016483528.1
PEP Infomation

PREDICTED: patatin-like protein 6 isoform X3 [Nicotiana tabacum]
Sequence

MACNAISNTQQEPSIDTDKLSYEIFSILESKFLFGYNDQKLWVPKELTSPIEEHKNDDVS
TIKNQRGKICILSIDGGGMRNILSGKALAYLEQALKVKSGNSHARIADYFDVAIGSGVGG
IFTAMLFSTEDKKRPVFQAEDTWKLLVEQGKKIYPLKGSNNAGKDFLRRVFRRGNTVSST
SGLEKAMKEAFVDKKTGRSLTLKDTLKPVLIPVYDLSSTAPFLFSRADAFESESFDFRLW
EVCKATAAEPGVFDPVCMKSVDGKTGCVAVDGGLAMSNPTAAAITHVLHNKQEFPFVRGV
EDILVLSLGTGQLLEGSFEYEHVKKWKAKDWAKPMARISGDGTADMVDHSVAMAFGQCRS
NNYVRIQLNSSS

Transcript Sequence

Gene sequence data has not been registered.